First Steps

Types of People

From the virus point of view it sees three types of people:

  • Those who it hasn't yet infected [the susceptibles S],
  • Those who currently have it [the infectious I],
  • and those who used to have it [the removed R].

These type of models are called compartmental models, and people can move between compartments in a logical way.

How the virus spreads (Maths part)

Suppose I have the virus, and am infectious for 8 days. If I meet 15 people in a day and there's an average of 5% chance of transferring the virus during each of those interaction, then over the 8 days I'll give it to roughly 8×15×0.05=6 people [5% is 0.05 as a fraction]. More generally between a start time and end time of measuring:

Number of new cases between the two times
=
Average number of susceptible people an infectious person is in close contact with in a day
×
Average chance of transferring the virus during an interaction
×
Number of infectious people
×
Time difference between the two times

Please stop and draw this out in your mind or on paper to see why the above makes sense.

Total number of infectious people at the end time
=
Total number of infectious people at the start time
+
Number of new cases between the two times
-
Number of new removed between the two times

So we still need to estimate the number of removed. A reasonable way of estimating it is

Number of new removed between the two times
=
Number of infectious people
÷
Average duration of infectiousness
×
Time difference between the two times

The above is pretty much all the maths required as a good starting point to model infectious diseases.